3DNA Homepage -- Nucleic Acid Structures

Homepage of the 3DNA suite of software programs for the analysis, rebuilding and visualization of 3-dimensional nucleic acid structures

OVERVIEW

This site x3dna.org presently has a traffic classification of zero (the lower the more traffic). We have probed twenty pages within the web page x3dna.org and found seventy-eight websites referencing x3dna.org. We have noted one contacts and directions for x3dna.org to help you contact them. This site x3dna.org has been online for six hundred and eighty-four weeks, eleven days, fourteen hours, and eighteen minutes.
Pages Analyzed
20
Links to this site
78
Contacts
1
Locations
1
Online Since
Dec 2011

X3DNA.ORG RANKINGS

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X3DNA.ORG HISTORY

This site x3dna.org was first filed on December 07, 2011. It is currently six hundred and eighty-four weeks, eleven days, fourteen hours, and eighteen minutes young.
REGISTERED
December
2011

DOMAIN MATURITY

13
YEARS
1
MONTHS
10
DAYS

LINKS TO WEB PAGE

3DNA Forum - Index

Did you miss your activation email. DSSR-Jmol featured in the cover image. Messages from the site administrator on 3DNA.

Nucleic Acid Database NDB

A Portal for Three-dimensional Structural Information about Nucleic Acids. The NDB contains information about experimentally-determined nucleic acids and complex assemblies. Use the NDB to perform searches based on annotations relating to sequence, structure and function, and to download, analyze, and learn about nucleic acids. Search DNA and its complexes.

Nucleic Acid Database NDB

A Portal for Three-dimensional Structural Information about Nucleic Acids. The NDB contains information about experimentally-determined nucleic acids and complex assemblies. Use the NDB to perform searches based on annotations relating to sequence, structure and function, and to download, analyze, and learn about nucleic acids. Search DNA and its complexes.

Nucleic Acid Database NDB

A Portal for Three-dimensional Structural Information about Nucleic Acids. The NDB contains information about experimentally-determined nucleic acids and complex assemblies. Use the NDB to perform searches based on annotations relating to sequence, structure and function, and to download, analyze, and learn about nucleic acids. Search DNA and its complexes.

SBGrid - Software Consortium for Structural Biology

Read the full story here. And read more in eLIFE. Featuring Bob Langridge and Tom Ferrin.

Merritt Lab - University of Washington Biomolecular Structure Center

Inference of TLS motion from refined structures. PRediction of Outcome using Sequence and Protein Experimental Results Online. Automated data-fitting for Thermal Shift Assays. Program suite for photorealistic molecular graphics. Database, Tutorial, MAD Phasing.

Xiang-Juns Corner

Random thoughts, mostly on scientific issues. Sunday, March 3, 2013. As the number of experimentally solved RNA-containing structures grows, it is becoming increasingly important to characterize the geometric features of the molecules in a consistent and efficient manner.

DSSR-Jmol Web Interface

DSSR-Enhanced Visualization of Nucleic Acid Structures in Jmol. To gain full access to Jmol scripting, and see the. The commands issued above are echoed in the text box. In the image window to see the contextual menu. For modified nucleotides, or.

REDUCE Suite - Index

The REDUCE Suite Forum, Bussemaker Laboratory. Did you miss your activation email. Welcome to the REDUCE Suite Forum. News related to the Forum. Setup and documentation of the REDUCE Suite of programs. REDUCE Suite - Info Center.

WHAT DOES X3DNA.ORG LOOK LIKE?

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CONTACTS

Xiang-Jun Lu

Department of Biological Sciences

New York, New York, 10027

US

X3DNA.ORG HOST

We caught that the main root page on x3dna.org took one thousand and ninety-two milliseconds to load. Our web crawlers could not find a SSL certificate, so therefore our parsers consider x3dna.org not secure.
Load time
1.092 seconds
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NOT SECURE
Internet Address
69.89.31.198

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PAGE TITLE

3DNA Homepage -- Nucleic Acid Structures

DESCRIPTION

Homepage of the 3DNA suite of software programs for the analysis, rebuilding and visualization of 3-dimensional nucleic acid structures

CONTENT

This site had the following in the web site, "3DNA a suite of software programs for the analysis, rebuilding and visualization of 3-Dimensional Nucleic Acid structures." Our analyzers noticed that the web page stated " Middot; DSSR has been published, and its results are reproducible." The Website also stated " Middot; Conformation of the sugar ring in nucleic acid structures. Middot; The DSSR - prefix and - cleanup options. Middot; Assignment of HETATM vs. ATOM records for modified nucleotides in PDB vs. Middot; The value of tiny and self-contained software in the big-data era. And have facilities for th." The website's header had 3DNA as the most important keyword. It was followed by DNA, RNA, and protein-DNA complexes which isn't as ranked as highly as 3DNA. The next words the site uses is structural analysis. model rebuilding was also included and could not be understood by web crawlers.

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