DSSR-Jmol Web Interface

The DSSR-Jmol integration makes salient features of DSSR readily accessible, either via the Java-based Jmol application itself, or its HTML5-based equivalent, JSmol. This simple web interface is based on the dssr.htm demo file distributed with jsmol.zip.

OVERVIEW

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3DNA Forum - Index

Did you miss your activation email. DSSR-Jmol featured in the cover image. Messages from the site administrator on 3DNA.

3DNA Homepage -- Nucleic Acid Structures

Middot; DSSR has been published, and its results are reproducible. Middot; Conformation of the sugar ring in nucleic acid structures. Middot; The DSSR - prefix and - cleanup options. Middot; Assignment of HETATM vs. ATOM records for modified nucleotides in PDB vs. Middot; The value of tiny and self-contained software in the big-data era. And have facilities for th.

3DNA Homepage -- Nucleic Acid Structures

Middot; Weird PDB entries. Middot; Paulings triplex model of nucleic acids is available in 3DNA. Middot; 3DNA fiber models. Middot; PyMOL wrapper to 3DNA fiber models. Has been designed from the ground up to make RNA. 3DNA is under active development.

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JMOL.X3DNA.ORG HOST

We caught that the main root page on jmol.x3dna.org took three hundred and seventy-five milliseconds to load. Our web crawlers could not find a SSL certificate, so therefore our parsers consider jmol.x3dna.org not secure.
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Internet Address
128.59.235.88

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PAGE TITLE

DSSR-Jmol Web Interface

DESCRIPTION

The DSSR-Jmol integration makes salient features of DSSR readily accessible, either via the Java-based Jmol application itself, or its HTML5-based equivalent, JSmol. This simple web interface is based on the dssr.htm demo file distributed with jsmol.zip.

CONTENT

This site had the following in the web site, "DSSR-Enhanced Visualization of Nucleic Acid Structures in Jmol." Our analyzers noticed that the web page stated " To gain full access to Jmol scripting, and see the." The Website also stated " The commands issued above are echoed in the text box. Other Jmol scripts can also be input there see examples. Right-click or Ctrl-click on Mac. In the image window to see the contextual menu. For modified nucleotides, or." The website's header had RNA Structure as the most important keyword. It was followed by Molecular Visualization, Structural Bioinformatics, and Base-pairs which isn't as ranked as highly as RNA Structure. The next words the site uses is hairpin. bulge was also included and could not be understood by web crawlers.

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